16028

BIO 117

 Botany for Herbivores: DEVELOPING CROP PLANTS AND AGRICULTURAL ECOSYSTEMS

Emily Pollina

 

 T Th    10:10 am-11:30 am

Lab: Th 1:30 pm-4:30 pm

RKC 115

RKC 114

SCI

Wild relatives of many important crop species, including potatoes, tomatoes, and broccoli, contain potent defenses against animals that might eat them.  How did these plants become safe for us to eat?  How do we deter other organisms from eating them? In this course, designed for non-majors, we will explore the ways in which humans have modified, and continue to modify, the plants we use as food and the challenges of ecosystems dominated by crop plants.  Through critical examinations of papers about agricultural science and laboratory explorations on plant physiology, growth, and defense, this course will equip you to evaluate evidence for the safety and efficacy of crop development and food production strategies.  Class size: 20

 

16029

BIO 120

 Measuring Nature

Gabriel Perron

 T Th    1:30 pm-4:30 pm

RKC 111 / 112

SCI

How is quackery different from a medical breakthrough? How do we know the world is getting warmer? Is the bell curve still relevant today? In this course designed for non-majors, students will be introduced to the principles of statistics and experimental design that are used to answer innumerable questions in biology and other sciences. In doing so, students will conduct simple laboratory experiments and learn basic computer skills that will enable them to analyze many kinds of data – small and big. Finally, because the development of statistics is closely linked to scientific discovery, students will study the lives and ideas of individuals associated with important controversies in environmental sciences and medicine while learning to identify the use (and misuse) of statistics in the news.  Class size: 20

 

 

16030

BIO 121

 Obesity

Michael Tibbetts

 W F     11:50 am-1:10 pm

RKC 103

SCI

Cross-listed: Global & Int’l Studies  According to the Centers for Disease Control, more than one-third of U.S. adults, and 17% of children and adolescents, are obese.  The estimated annual cost of obesity was $147 billion in 2008.  This course will explore the potential factors contributing to the obesity epidemic, by examining epidemiological and experimental evidence.  These factors include: behavior, evolution, genetics/physiology, and microbiome.  In the laboratory we will explore the influence of genetics on obesity as well as the efficacy of interventions, using an emerging model system for the study of metabolism and obesity, zebrafish. Prerequisite: passing score on Part I of the Mathematics Diagnostic, and experience in high school biology and chemistry.  Class size: 24

LAB OPTIONS:

16031

BIO 121 LBA

 Obesity

Michael Tibbetts

LAB: M   1:30 pm-4:30 pm

RKC 114

SCI

 

16033

BIO 121 LBB

 Obesity

Michael Tibbetts

LAB:  T   1:30 pm-4:30 pm

RKC 114

SCI

 

 

16034

BIO 154

 ON THE SHOULDERS OF GREEN GIANTS: Introduction to Plant Biology

Emily Pollina

M W     10:10 am-11:30 am

LAB:  M 1:30 pm-4:30 pm

RKC 115

RKC 112

SCI

Plants are an important part of every ecosystem they inhabit, providing carbon and energy to the organisms that feed on them. Plants perform all the tasks we are familiar with from animal studies- acquiring energy, nutrients and water, growing and reproducing, sensing and responding to their environments- but the ways in which they do these tasks differ from animals.  In this introductory course, we will examine the ways in which plants perform each of these tasks differently from animals. Topics include photosynthesis, cellular respiration, food webs, organism interactions and plant defenses. In the lab, you will explore the scientific process- reading and critiquing works by practicing scientists in the discipline to help you determine what is already known, asking questions, designing experiments, and reporting results.   In the lab, you will perform field explorations of local ecosystems, explore antimicrobial properties of plant chemicals, and test hypotheses about plant-microbe interactions, and control of plant signaling and behavior. Open to First-Year students only. 

Class size: 20

 

16035

BIO 164

 Practicum in Neuroethology

Arseny Khakhalin

M          8:30 am-11:30 am

RKC 114

SCI

This 2-credit introductory laboratory course is designed for biology majors in their first year of study. We will run a series of behavioral experiments in Xenopus tadpoles, studying their locomotory responses to visual and acoustic stimulation. We will learn and troubleshoot the techniques, design our experiments, perform the study, and analyze our results. The course will give you an experience in authentic scientific research, as some of the questions we will be asking about the logic of multisensory integration in the tadpole brain had never been asked before. Class size: 20

 

16036

BIO 165

 Microbial Techniques WORksHOp

Brooke Jude

 T Th    8:50 am-9:50 am

RKC 112

SCI

This 2-credit laboratory course is designed for intended biology majors in their first year of study.  The course will introduce students to the techniques involved in experimental design, execution, trouble shooting, and preliminary data analysis. Utilizing microbial biology, students will learn standard culturing techniques, biochemical and molecular identification tests, and various bioassays. This course will meet twice a week for 1 hour per session, and grading criteria will be based on participation, lab notebook data collection, and a final poster presentation.  Text book: Writing in Biological Sciences, Angelika Hofmann
Priority to first year students. Class size: 20

 

16037

BIO 201

 Genetics and Evolution

Brooke Jude

M W     8:30 am-11:30 am

RKC 111 / 112

SCI

Cross-listed:  Mind, Brain & Behavior;  Global & Int’l Studies   This course is an introduction to the mechanisms of inheritance and the generation of diversity in eukaryotic organisms.  This course takes a modern approach to the study of genetics in which classical ideas about genotype, phenotype and inheritance are integrated into the modern molecular and genomic understanding of the processes involved in the generation of diversity.  In addition to discussions of the molecular mechanisms involved in DNA replication,  recombination, the generation and repair of mutations, and the relationship between genotype and phenotype, special consideration is given to our understanding of the processes involved in generating population-level variation in complex traits and how this understanding can help us identify the myriad genetic and non-genetic factors influencing these traits.  The laboratory consists of a semester long project involving the genetic manipulation of a model organism’s genome to address one or more topics in the course.  Prerequisite: One biology course at the 140 level or higher.  Class size: 20

 

16038

BIO 202

 Ecology and Evolution

Bruce Robertson

 W F     1:30 pm-4:30 pm

RKC 114 / 115

SCI

Cross-listed:  Environmental & Urban Studies   This core course for biology majors is an introduction to the general principles of ecology and evolution that, with genetics, form the core of biological understanding. In addition to studying foundational ideas in both ecology and evolution, we will explore modern topics at the boundary between these two areas. We will consider, for example, how genetic variation among individual organisms can influence ecological interactions, and how these interactions can influence fitness. We will focus on a mechanistic understanding of processes, using model-building to inform that understanding.  Prerequisite: Successful completion of a course in biology numbered 140 or above.  Class size: 20

 

16039

BIO 208

 Biology Seminar

Gabriel Perron

 Th       12:00 pm-1:00 pm

RKC 103

 

1 credit  This course will provide students with broad exposure to biology through the biology visiting speaker seminar series. Students will hear about the wide-ranging research interests of invited biologists and have opportunities to interact informally with them. The course is graded Pass/Fail and students are responsible for short follow-up assignments for at least 80% of the talks. Recommended for all biology majors and other interested students.  Class size: 60

 

16040

BIO 244

 Biostatistics

Gabriel Perron

 W F     1:30 pm-4:30 pm

RKC 111

MATC

Cross-listed:  Environmental & Urban Studies, Global & Int’l Studies, Mathematics     This course introduces students to the statistical methods biologists use to describe and compare data. Students will learn methods that are appropriate for different types of data. Topics covered include elementary probability and statistics, characteristics of frequency distributions, hypothesis testing, contingency tests, correlation and regression analysis, different ways to compare means, nonparametric tests, and an introduction to multivariate tests. This course is intended for sophomore and junior biology majors, although it is open to students of all years.  One objective of the course is to provide biology majors the statistical background they need to analyze data for their own senior research; biology students should take this course before their senior year, if possible. Notice, though, that the topics in this course are applicable to many advanced courses. Prerequisite: passing score on part I of the Mathematics Diagnostic and at least one introductory biology course.  Class size: 20

 

16041

BIO 311

 Field Ornithology

Bruce Robertson

 T Th    1:30 pm-2:50 pm

LAB:   F  8:30 am-12:30 pm

RKC 115

SCI

Cross-listed:  Environmental & Urban Studies  This course will present birds both as a unique group and as representative of vertebrates.  It will emphasize adaptation, ecology, and behavior of birds, the physical basis of flight, and introduce students to laboratory and field methods used in modern ornithology. We also will consider current views of the systematic relationships among living birds, and the evolutionary history of birds, including the debate regarding their origin in relation to dinosaurs and the origin of flight. Finally, we will examine case studies in bird conservation to understand the interaction of human and biological causes of, and solutions to, those problems. The laboratory portion of the class will include instruction in identification of all regional bird species by sight and sound. This will include field trips to local habitats / biological reserves and the study of museum specimens. Students will design and conduct small-scale behavioral research experiments (e.g. bioacoustics) with on-campus bird populations and will exploit publicly available and continental-scale databases to ask questions about bird ecology, evolution or conservation which will be submitted as both an oral report and scientific research paper.   Class size: 16

 

16073

BIO / EUS 316

 Waste

Elias Dueker

T Th     10:10 am-11:30 am

Lab: W   1:30 pm-4:30 pm

 RKC 111

 RKC 112

SCI

Cross-listed: Biology  This course takes a close look at the long-term implications of our standard approaches to handling human waste. Innovations in waste treatment are required as we rapidly reach saturation, resulting in increased air and water pollution and decreasing space for land fills. Students in this class will learn the science behind current waste treatment technology (water, air, and land-based) and be exposed to cutting-edge alternative approaches (water reclamation, living machines, etc.).  Lab work will be microbiological and field-based, and will allow students to become familiar with the bacteria and biogeochemical processes we rely on for most current and cutting-edge waste-treatment approaches.  Prerequisites: Either  EUS 221, EUS 222, BIO 202, or permission of instructor. This class will include engagement with local and regional communities and will include joint classroom and field experiences with Prof. Ellen Driscoll's ART206 Sculpture II:  Fluid Dynamics class and Prof. Sophia Stamatapoulou-Robbins' ANTH323 The Politics of Infrastructure class.  Class size: 16

 

16043

BIO 318

 Cellular AND Molecular NeurosciencE

Arseny Khakhalin

 T Th    10:10 am-11:30 am

LAB: F    1:30 pm-4:30 pm

HEG 106

RKC 112

SCI

Cross-listed:  Mind, Brain & Behavior  Nervous systems are built of individual cells, and therefore all aspects of neural function, development, and pathology can be linked to interactions of proteins: channels, receptors, transcription factors, and other molecular machines. This course will start with an introduction to electrophysiology (the study of electrical properties of neural cells), and move to topics in synaptic plasticity, neural development (axon guidance, projection refinement), and molecular mechanisms of neurodevelopmental disorders, such as autism. The labs will be built around projects in crustacean electrophysiology. Prerequsites: working knowledge of either neuroscience or cell and molecular biology.  Class size: 16

 

16044

BIO 406

 Cholera: Pandemics, PATHOLOGY AND MOLECULAR MECHANISMS

Brooke Jude

 F         8:30 am-10:30 am

RKC 111

SCI

2 credits  A microbe that caused seven worldwide pandemics and continues to plague human populations, Vibrio cholerae and the disease it causes, will be studied in this upper level seminar.  The course will examine the historical significance of cholera, the environmental and socioeconomic factors that influence outbreaks, and the complex molecular genetics that allow this microbe to be so effectively pathogenic.  Students will read and analyze topically relevant primary, secondary, and historical literature, as well as participate in group-work, give oral presentations, and produce original writing on the topic.  Prerequisites: BIO201 is required.  CHEM201/ 202, BIO302, and BIO303 are helpful, but not essential. Class size: 16

 

16595

BIO 416

 CURRENT ISSUES IN ECOSYSTEM ECOLOGY

Stuart Findlay

Colin Fuss

AJ Reisinger

 M            3:10pm- 4:30 pm

RKC 115

 

2 credits 

Cross-listed:  Environmental & Urban Studies This seminar will use a combination of recorded seminars from the archives of the weekly seminar series at the Cary Institute of Ecosystem Studies, and recent articles from the primary literature to discuss current topics in Ecosystem Ecology. The seminar will focus on three topics:  Climate change, Invasive Species, and Pollution. Recorded seminar topics may include “Understanding Soil Microbial Responses to Climate Change”, “Landscape Demography and a Different Perspective on Biological Invasions”, and “Ecological Effects of Common Pharmaceutical Compounds in Streams”. Each week students will lead discussions on that week’s seminar and journal articles that relate to the seminar. Class size: 12